Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887068.1_cds_XP_016441388.1_36753
CDS Infomation

[gene=LOC107766982] [db_xref=GeneID:107766982] [protein=cysteine--tRNA ligase 2, cytoplasmic-like] [protein_id=XP_016441388.1] [location=complement(30008..31579)] [gbkey=CDS]
Sequence

ATGGCGGAGGAGAACGTGGCGATGGAATTAAAGCTATACAATACTATGACGAAACAGAAG
GAGGTATTCAAATCGAAGGAACCTGGAAAAGTTAGAATGTACGTCTGTGGCGTTACGCCT
TACACCTCCAGTCACATCGGCCATGCCCGCGCATATGTAGCCTTCGACGTTCTCTACCGG
TATCTAAAATACTTAGGATACGATGTCGTATACGTCCGCAACTTCACTGATATAGATGAT
AAAATAATAAATGAGGCTAAAAAACGTGAAGAAAATCATGATCCAATTGCTCTGAGTTGT
CAATTCAGCCAAGAGTTTCTAAAAGACATGGATGATCTCCAAGTCCTCCCACCGACTCAT
CAGCCGCGTGTAACTGAGCATATGGACCAAATTAAGGATATGATTGCTAACATAATTTCT
AATGGATATGGATACACAATTGATGGAGATGTTTATTTCTCGGTCGATAGTTTTCCAGAG
TACGGTAGATTATTATCTGGTGGAAGAAAATTAGAAGACAATCGCGCTGGAGCAAGAAAA
GGTGAAGTTGATTTAAGAAAGCGAAACACTGCTGATTTTGCCTTGTGGAAAGCTGCAAAA
TCTGGTGAACCGCATTGGGATAGCCCCTGGGGTCCAGGAAGACCGGGTTGGCATATTGAG
TGCAGCGCAATGAGCGCGCACTATTTAACACATTCGTTTGATATACATGGTGGTGGAATG
GACTTGAAATTTCCTCACCATGAAAATGAGATTGCTCAAAGTTGCGCGGCTTGCCCGGAG
AGTAATGTTAGTTATTGGATGCATAATGGTTTTGTTAAGGACAGAGATGGTGAGAAGATG
TCGAAATCATTAGGGAATTTCTTCACTATACGTGATGTTACTCGATTGTACCATCCCCTT
GCATTGAGGTACTTCTTATTGGGGACTCACTACCGGTCTGATGTTAATTACTCAATATCA
CAGATTGAAATTGCTTCAGATTCTGTGTTCTACATTTATCAGACCTTACGTGATACTGAA
GAAGCCTTATTGTCATCAGTTTTCCAACAATTAAGAACTGATGAAACAATTAGGGACGTG
GCGCGTGTTAGCTCTGAGGCAGAAAAATGCATCAAGAAGCTGCGTAATGAGTTGGAGACA
AAACTTGCGGATGATTTGCATACACCTACAATTTTAAATGCTGCACTTCAGGAAGCCCTT
GGACTTATGAATAGTTATTTGAACATGCTGAAGAAAAGGCAAATGCAACAGCGCCAAGAA
CAGTTGTTTTTGTCCCTAACTGAGCTGGAGAAAGAAGTTAAGGCGGTGTTGGATGTACTT
GGATTGCTCGCTGCTCGTTCAACTTATGCTGAGGTTTTGCAACAGATTAAAGAGAGAGCA
TTGAAAAGAGCAGAGTTGACGGAGGAAGATATCTCGCGTGCAATAGAGGAAAGAGCTCTG
GCAAGGAAAAATAAGGAGTTTGCACGAAGCGATCAGATTAGAAGTGATTTGGTGGCCAAG
GGGATTGCTTTAATGGATATAGGAAGAGAAACAGTTTGGAGGCCTTGTGTAAGACCTGGT
CCCGGAGAGTAA

Peptide Sequence

PEP ID

XP_016441388.1
PEP Infomation

PREDICTED: cysteine--tRNA ligase 2, cytoplasmic-like [Nicotiana tabacum]
Sequence

MAEENVAMELKLYNTMTKQKEVFKSKEPGKVRMYVCGVTPYTSSHIGHARAYVAFDVLYR
YLKYLGYDVVYVRNFTDIDDKIINEAKKREENHDPIALSCQFSQEFLKDMDDLQVLPPTH
QPRVTEHMDQIKDMIANIISNGYGYTIDGDVYFSVDSFPEYGRLLSGGRKLEDNRAGARK
GEVDLRKRNTADFALWKAAKSGEPHWDSPWGPGRPGWHIECSAMSAHYLTHSFDIHGGGM
DLKFPHHENEIAQSCAACPESNVSYWMHNGFVKDRDGEKMSKSLGNFFTIRDVTRLYHPL
ALRYFLLGTHYRSDVNYSISQIEIASDSVFYIYQTLRDTEEALLSSVFQQLRTDETIRDV
ARVSSEAEKCIKKLRNELETKLADDLHTPTILNAALQEALGLMNSYLNMLKKRQMQQRQE
QLFLSLTELEKEVKAVLDVLGLLAARSTYAEVLQQIKERALKRAELTEEDISRAIEERAL
ARKNKEFARSDQIRSDLVAKGIALMDIGRETVWRPCVRPGPGE

Transcript Sequence

Gene sequence data has not been registered.